Search results - 17 results
Development of a shotgun metagenomics workflow for the comprehensive surveillance of biological impurities in vitamin-containing food products
LWT, Volume 231 (2025) Keywords: Antimicrobial resistance genes Food safety monitoring genetically modified microorganism shotgun metagenomics Vitamins Abstract: Commercial vitamin-containing food ...
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
on the Belgian market. In total, 75 collected product samples were cultured on a general medium and, in case of bacterial growth, two isolates per product sample were collected and characterized using ...
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Navickaite, Indre; Bartsch, Lee-Julia; Grützke, Josephine; Overballe-Petersen, Søren; Rasmussen, Astrid; Otani, Saria; Michelacci, Valeria; Matamoros, Bosco Rodríguez; González-Zorn ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
composing genes such as virulence or antimicrobial resistance (AMR) genes, without prior knowledge, nor the need to isolate. Such approaches could offer efficient and fast solutions to limitations faced by ...
Retrospective survey of unauthorized genetically modified bacteria harbouring antimicrobial resistance genes in feed additive vitamin B2 commercialized in Belgium: Challenges and solutions
suspicious samples contaminated with additional unknown GM bacterial strains as well as potential health and environmental risks related to the unexpected presence of full-length AMR genes could be ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
PLoS One, Volume 13, Issue 2 (2018) Keywords: bacterial phylogeny; food-borne; genes; NGS; WGS; computational biology/bioinformatics; disease outbreaks; outbreak; performance evaluation; pipeline; ...
Genetic elements associated with antimicrobial resistance among avian pathogenic Escherichia coli.
Anti-Bacterial Agents Chickens Drug Resistance, Bacterial Escherichia coli Escherichia coli Infections Escherichia coli Proteins Integrons Poultry Diseases Abstract: BACKGROUND: Avian-pathogenic Escherichia coli ...
Construction of Nontoxigenic Mutants of Nonproteolytic Clostridium botulinum NCTC 11219 by Insertional Mutagenesis and Gene Replacement.
p.3100-3108 (2016) Keywords: Botulinum Toxins Clostridium botulinum type E Gene Deletion Hazard Analysis and Critical Control Points Hot Temperature Mutagenesis, Insertional Recombination, Genetic Sodium ...
Compensatory Mutations of Rifampin Resistance Are Associated with Transmission of Multidrug-Resistant Mycobacterium tuberculosis Beijing Genotype Strains in China.
Shen, A-Dong Source: Antimicrob Agents Chemother, Volume 60, Issue 5, p.2807-12 (2016) Keywords: Bacterial Proteins China Drug Resistance, Multiple, Bacterial Genotype Microbial Sensitivity Tests Mutation ...
Isolation and characterization of antibiotic-resistant bacteria from pharmaceutical industrial wastewaters.
infection outbreaks which may represent a significant dissemination mechanism of antibiotic resistance genes among pathogenic bacterial populations. The present study aims to determine the multi-drug ...