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Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
compared to the conventional methods. The meat previously spiked with STEC was also used to investigate the difference between Illumina short reads or Oxford Nanopore Technologies (ONT) long reads ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
microbiology. Compared to short read sequencing (Illumina), this technology allows to unambiguously detect and scaffold microbial genes to their host chromosomes, even for complex metagenomics samples, allowing ...