Search results - 53 results
Towards facilitated interpretation of shotgun metagenomics long-read sequencing data analyzed with KMA for the detection of bacterial pathogens and their antimicrobial resistance genes
Michelacci, Valeria; Matamoros, Bosco Rodríguez; González-Zorn, Bruno; Brouwer, Michael S. M.; Di Marcantonio, Lisa; Bloemen, Bram; Vanneste, Kevin; Roosens, Nancy H. C. J.; AbuOun, Manal; De Keersmaecker, ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Stefan; Nancy Roosens; De Keersmaecker, Sigrid C J; Vanneste, Kevin Source: J Clin Microbiol (2024) Keywords: Illumina nanopore sequencing outbreak public health whole-genome sequencing. Abstract: ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Hoffman; Nancy Roosens; Sigrid C.J. De Keersmaecker; Kevin Vanneste Source: J Clin Microbiol (2024) Abstract: Whole-genome sequencing has become the method of choice for bacterial outbreak investigation, ...
Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM Bacillus licheniformis producing alpha-amylase
Publication Type: Peer reviewed scientific article Authors: Fraiture, Marie-Alice; Gobbo, Andrea; Guillitte, Chloé; Marchesi, Ugo; Verginelli, Daniela; De Greve, Joke; D'aes, Jolien; Vanneste ...
Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin.
Publication Type: Peer reviewed scientific article Authors: Laurence Yehouenou, Carine; Bert Bogaerts; Vanneste, Kevin; Sigrid C.J. De Keersmaecker; Nancy Roosens; Kpangon, Arsène A; Affolabi, ...
Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance
Publication Type: Peer reviewed scientific article Authors: Laura Van Poelvoorde; Kevin Vanneste; Sigrid C.J. De Keersmaecker; Isabelle Thomas; Nina Van Goethem; Steven Van Gucht; Xavier Saelens; ...
Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.
Publication Type: Peer reviewed scientific article Authors: Nouws, Stéphanie; Bavo Verhaegen *; Denayer, Sarah; Florence Crombé *; Denis Piérard; Bert Bogaerts *; Kevin Vanneste *; Kathleen Marchal; ...
Using a combination of short and long read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum-beta-lactamases (ESBL) in clinical Shigella and Salmonella isolates in Belgium
Publication Type: Peer reviewed scientific article Authors: Bas Berbers; Kevin Vanneste; Nancy Roosens; Marchal,K.; Pieter-Jan Ceyssens; Sigrid C.J. De Keersmaecker Source: Microbial Genomics, ...