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Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
Salmonella; Salmonella enterica; Salmonella typhimurium; SNP; subtyping; whole genome sequencing Abstract: Whole genome sequencing represents a promising new technology for subtyping of bacterial pathogens. ...
Survey on the Use of Whole-Genome Sequencing for Infectious Diseases Surveillance: Rapid Expansion of European National Capacities, 2015-2016.
Volume 5 (2017) Keywords: infectious disease sequencing Surveillance whole genome Abstract: Whole-genome sequencing (WGS) has become an essential tool for public health surveillance and molecular ...
Guest lecture molecular- microbial techniques: the use of whole genome sequencing (WGS) for typing of bacterial pathogenic isolates
UGent, NA (2016) Keywords: Genome M Molecular next generation sequencing pathogenic Technique typing use WGS whole genome whole genome sequencing Health Topics: Health and disease monitoring Surveillance ...
Whole genome sequencing to help enforcement laboratories for the development of detection method for an EU-unauthorized genetically modified Bacillus subtilis overproducing riboflavin
Keywords: abstract an Bacillus Bacillus subtilis detection detection method Development genetically Genetically modified Genome GMO GMO detection Help Laboratories method riboflavin WGS whole genome whole ...
The added value of whole genome sequencing for the development of a specific detection method for an EU-unauthorized genetically modified Bacillus subtilis overproducing riboflavin
the impact of Whole Genome Sequencing (WGS) on food safety management: within a one health framework, NA, Issue FAO/GMI, NA (2016) Keywords: a an Bacillus Bacillus subtilis detection detection method ...
The use of whole genome sequencing (WGS) for typing of bacterial pathogenic isolates
Genome ON pathogenic Societies Society use WGS whole genome whole genome sequencing Health Topics: Food consumption and food safety Consommation et sécurité alimentaires Voedselconsumptie en –veiligheid ...
Strategies to detect unauthorized GMO in the food and feed chain (PhD thesis)
https://www.sciensano.be/en/biblio/strategies-detect-unauthorized-gmo-food-and-feed-chain-phd-thesis
technology, through a whole genome sequencing (WGS) approach, was also investigated. As this last approach does not theoretically require any prior information about the targeted sequences, GMO composed only of ...
Data analysis associated with the use of whole genome sequencing for subtyping of pathogenic microorganisms, Salmonella Typhimurium as a case study
sequencing Abstract: As the cost of bacterial whole genome sequencing (WGS) by NGS continues to decline, its application for routine (sub)typing of pathogenic microorganisms quickly becomes a reality. NGS ...
User-friendly WGS analysis of Salmonella Enteritidis PT4 outbreaks
Keersmaecker; BSFM Source: (2015) Keywords: analysi analysis conference food Food Microbiology microbiology ON outbreak outbreaks Salmonella Salmonella enteritidis WGS whole genome sequencing Category: ...
Whole Genome Sequence Analysis of Salmonella Enteritidis PT4 Outbreaks from a National Reference Laboratory's Viewpoint.
and human isolates being available, and this for both outbreaks, made these the ideal case study for a retrospective whole genome sequencing (WGS) analysis with the goal to investigate the feasibility ...