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A Bioinformatics Whole-Genome Sequencing Workflow for Clinical Mycobacterium tuberculosis Complex Isolate Analysis, Validated Using a Reference Collection Extensively Characterized with Conventional Methods and In Silico Approaches
approaches supplemented with public data. For SNP-based AMR prediction, results from molecular genotyping methods were supplemented with modified datasets allowing to greatly increase the set of evaluated ...
Clinical Origin and Species Distribution of spp. Isolates Identified by Molecular Sequencing and Mass Spectrometry: A European Multicenter Hospital Prospective Study.
identify isolates at the species level. The identification was performed by PCR-sequencing and phylogenic-tree approach. Both methods are used as gold standard for the evaluation of mass spectrometry. ...
The taxonomy of the Trichophyton rubrum complex: a phylogenomic approach
Publication Type: Peer reviewed scientific article Authors: Luc Cornet; Elizabet D'hooge; Nicolas Magain; Dirk Stubbe; Ann Packeu; Denis Baurain; Pierre Becker Source: Microbial Genomics, Volume 7, Issue 11 (2021) Keywords: Dermatophytes Fungi Genomi ...
Targeted LC-MS/MS combined with multilocus DNA metabarcoding as a combinatory approach to determine the amount and the source of pyrrolizidine alkaloids contamination in popular cooking herbs, seeds, spices and leafy vegetables
Publication Type: Peer reviewed scientific article Authors: Jean-François Picron; Florian Philippe; Nelly Debrulle; Els Van Hoeck; Nicole Giraud; Séverine Goscinny; Celine Vanhee Source: Food Additives & Contaminants: Part A (2021) Keywords: aromatic ...
Whole Genome Sequencing Provides an Added Value to the Investigation of Staphylococcal Food Poisoning Outbreaks
and employed. The custom compiled database and applied parameters were made publicly available in an online user-friendly interface. As an all-in-one approach with high resolution, WGS additionally ...
Urban environment and mental health: the NAMED project, protocol for a mixed-method study
mental health are still not well understood. These associations are highly complex and require an interdisciplinary and integrated research approach to cover the broad range of mitigating factors. This ...
Living with a chronic disease: insights from patients with a low socioeconomic status
and iterative approach. Results Fifteen patients were interviewed. Six major themes were identified: a heavy bag to carry, loss of autonomous life, inner and outer loneliness, emotional imbalance, unmet ...
Recommendations to plan a national burden of disease study
(Information for Action) project is a European Commission Joint Action on Health Information which has promoted the potential role of burden of disease (BoD) approaches to improve the current European ...
Association between urban environment and mental health in Brussels, Belgium
residence and processed using Geographical Information Systems (GIS). Mental health status was approached through several validated indicators: the Symptom Checklist-90-R subscales for depressive, anxiety and ...
Reverse thinking: taking a healthy diet perspective towards food systems transformations
characteristics. Transformational approaches and policies should also take into account the stage of food system development requiring different strategies to ensure healthier diets for consumers. We review current ...