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Use of next‐generation sequencing in microbial risk assessment
applications are not new in food microbiology with applications ranging from pathogen detection along the food chain, food epidemiology studies, whole genome analysis of food‐associated microorganisms up to ...
Survey on the Use of Whole-Genome Sequencing for Infectious Diseases Surveillance: Rapid Expansion of European National Capacities, 2015-2016.
priorities. The sampling frame as well as bioinformatics analysis varied by pathogen/resistance issue and country. Core genome multilocus allelic profiling, also called cgMLST, was the most frequently used ...
Travel- and community-based transmission of multidrug-resistant Shigella sonnei lineage among international orthodox jewish communities
pathogen POPULATION risk S SB- IM Shigella Shigella sonnei Species Spread State States strain Transmission Travel trend trends United Kingdom United States United-kingdom whole genome Abstract: Shigellae are ...
Molecular subtyping of Salmonella Typhimurium with multiplex oligonucleotide ligation-PCR (MOL-PCR)
Gödel Prime Product high-throughput assay IS Isolation IT Luminex lysis Marker Markers method methods MOL-PCR Molecular Molecular biology molecular markers molecular subtyping Multiplex assay ON pathogen ...
Development of xMAP and xTAG Luminex assays for public health surveillance
Keywords: Development health Indoor air Luminex pathogen public public health Public-health Subtyping Health Topics: Health and disease monitoring Surveillance de la santé et des maladies Ziekten en ...
Molecular and clinical investigation of Zika virus outbreak in New Caledonia
Molecular neurological non-invasive ON outbreak outbreak investigation pathogen public public health Public-health region result results Rna Sample Samples SENSITIVITY serum Spread strain time urine VIRUS WHO ...
Experimental evidence for proteins constituting virion components and particle morphogenesis of bacteriophage ZF40.
Volume 363, Issue 6 (2016) Keywords: Bacteriophages Capsid Proteins Gene Order Genome, Viral Open Reading Frames Proteome Viral Proteins Virion Abstract: Bacteriophage ZF40 is the only currently available, ...
Whole Genome Sequence Analysis of Salmonella Enteritidis PT4 Outbreaks from a National Reference Laboratory's Viewpoint.
Genomics health Human Infectious Infectious diseases INFORMATION Institute investigation IS IT journal Laboratories method methods Molecular Molecular biology national ON ORIGIN outbreak outbreaks pathogen ...
The usefulness of whole genome sequencing for outbreak investigation of food pathogens, Salmonella Enteritidis as a case study
Source: LabInfo, Volume submitted (2015) Keywords: a abstract AS Case case studies Case study case-study food Genome investigation outbreak pathogen Salmonella Salmonella enteritidis study whole genome ...
Quantification of rHVT-F genome load in feather follicles by specific real-time qPCR as an indicator of NDV-specific humoral immunity induced by day-old vaccination in SPF chickens.
Oligonucleotides Real-Time Polymerase Chain Reaction Specific Pathogen-Free Organisms Turkey Vaccination Abstract: The purpose of this study was to look for a reliable molecular method for confirmation of uptake of ...