Search results - 4 results
Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
contaminant present in the sample at once, possibly also at the SNP level. At the time this study started, shotgun metagenomics for the study of food contaminants was in its infancy. Moreover, strain-level ...
Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteriaAbstractBackgroundResultsConclusion
sequencing, of almost all the bacterial species present in a complex mock community. Conclusion: Amongst the 6 tested methods, the Quick- DNA HMW MagBead Kit (Zymo Research) was considered as the most suitable ...
Simultaneous determination of parabens, bisphenols and alkylphenols in human placenta by ultra-high performance liquid chromatography- tandem mass spectrometry
1121, Number 102 (2019) Keywords: Alkylphenol Bisphenol endocrine disruptor Paraben Placenta UHPLC-MS/MS Abstract: This study presents de development and validation of an ultra- high performance liquid ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
presented in this study illustrate the importance of using correct data analysis strategies and to define benchmark and fine-tune parameters applied within routine data analysis pipelines to obtain ...