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Statistical framework for detection of Genetically Modified Organisms based on Next Generation Sequencing
predict the number of NGS reads needed to detect transgene sequences, to prove their integration into the host genome and to identify the specific transgene event in a sample with known composition. This ...
Characterization of newly isolated lytic bacteriophages active against Acinetobacter baumannii.
liquid culture and low frequency of occurrence of phage-resistant mutant bacterial cells. Genomic analysis showed that while Acibel004 represents a novel bacteriophage with resemblance to some unclassified ...
Buruli ulcer
about disease transmission and there is no vaccine. There have been several recent advances in the field. These include sequencing of the bacterial genome and of the giant plasmid responsible for ...
Effect of PstS sub-units or PknD deficiency on the survival of Mycobacterium tuberculosis.
Molecular Sequence Data Mycobacterium tuberculosis Protein Kinases Reverse Transcriptase Polymerase Chain Reaction Tuberculosis Abstract: The membrane-associated phosphate-specific transporter (Pst) complex ...
Genomic analysis of Pseudomonas aeruginosa phages LKD16 and LKA1: establishment of the phiKMV subgroup within the T7 supergroup.
Sequences Sequence Analysis Sequence Homology Terminal Repeat Sequences Transmission Viral Viral Genes Viral Genome Viral Proteins Abstract: Lytic Pseudomonas aeruginosa phages LKD16 and LKA1 were locally ...
Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei.
antimicrobials, including the fluoroquinolones. Here we analyse nearly 400 S. sonnei whole genome sequences from both endemic and non-endemic regions to delineate the evolutionary history of the recently emergent ...
Exploring the added value of Whole Genome Sequencing in routine and pandemic viral surveillance
Publication Type: Dissertation Authors: Laura Van Poelvoorde Source: (2023) Abstract: Whole genome sequencing (WGS) has opened up a lot of new possibilities for virus surveillance, however, many ...
Development and evaluation of a core genome multilocus sequence typing scheme for Paenibacillus larvae, the deadly American foulbrood pathogen of honeybees.
Genome, Bacterial Multilocus Sequence Typing Paenibacillus larvae whole genome sequencing Abstract: Paenibacillus larvae is the causative agent of the fatal American foulbrood disease in honeybees (Apis ...