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Listeria surveillance in Belgium
evolution in molecular typing, the NRC completely switched to Whole-Genome-Sequencing (WGS) for cluster detection. Therefore, an in-house Galaxy-based bio-informatic pipeline was developed. For the strain ...
Public health in the genomic era: will Public Health Genomics contribute to major changes in the prevention of common diseases?
The completion of the Human Genome Project triggered a whole new field of genomic research which is likely to lead to new opportunities for the promotion of population health. As a result, the ...
Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei.
antimicrobials, including the fluoroquinolones. Here we analyse nearly 400 S. sonnei whole genome sequences from both endemic and non-endemic regions to delineate the evolutionary history of the recently emergent ...
Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198.
an emerging problem within this serotype. We used whole-genome sequencing (WGS) to investigate the phylogenetic structure and AMR content of 121 S.enterica serotype Kentucky sequence type 198 isolates ...
Integrative transnational analysis to dissect tuberculosis transmission events along the migratory route from Africa to Europe.
Mycobacterium tuberculosis isolates from these recently arrived migrants were analysed by Mycobacterial Interspersed Repetitive-Unit/Variable-Number of Tandem Repeat (MIRU- VNTR) and subsequent whole genome ...
Whole-genome-based phylogenomic analysis of the Belgian 2016-2017 influenza A(H3N2) outbreak season allows improved surveillance.
Influenza, Human Phylogeny Public Health Surveillance whole genome sequencing Abstract: Seasonal influenza epidemics are associated with high mortality and morbidity in the human population. Influenza ...