Search results - 96 results
Salmonella spp. as a be.Prepared Case Study for Integrating Microbial Genomic and Health Data in Public Health Surveillance
seminar for Infectious Diseases, Sciensano, Brussels, Belgium (2025) Keywords: Genomics national reference center public health Salmonella Surveillance Abstract: An interoperable architecture is essential ...
be.Prepared: Setting up a cloud-based bioinformatics platform and coupled NRC usability platform for integrated genomic-epidemiological analysis at a national level
underlying reference sequence databases are updated ensuring availability of up-to-date genomic indicators. For bacterial pathogens, automated detection of genomic clusters is performed using single-linkage ...
Genetic relatedness of Staphylococcus aureus isolates within food outbreaks by single nucleotide polymorphisms.
Food Poisoning Staphylococcal Infections Staphylococcus aureus whole genome sequencing Abstract: Investigation of bacterial food outbreaks by whole genome sequencing can rely on the inspection of the ...
Galaxy @Sciensano: a comprehensive bioinformatics portal for genomics-based microbial typing, characterization, and outbreak detection.
Milis; Nathalie Goeders; Sigrid C.J. De Keersmaecker; Nancy Roosens; Raf Winand; Kevin Vanneste Source: BMC Genomics, Volume 26, Issue 1 (2025) Keywords: Computational Biology Disease Outbreaks Genome, ...
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
Kevin Vanneste Source: Frontiers in Microbiology, Volume 14 (2023) Keywords: Bacillus cereus Food Additives riboflavin Surveillance whole-genome sequencing Abstract: Bacillus cereus is a spore-forming ...
Azithromycin resistance in Escherichia coli and Salmonella from food-producing animals and meat in Europe.
Bacterial Genotype Macrolides Meat Microbial Sensitivity Tests Plasmids Salmonella Swine whole genome sequencing Abstract: OBJECTIVES: To characterize the genetic basis of azithromycin resistance in ...
The ambitious plan to integrate genomics and patient data in the surveillance of infectious disease and AMR in Belgium: Experiences from be.Prepared
Genomes, Big Data and Emerging Technologies, Antimicrobial Resistance- Genomes, Big Data and Emerging Technologies, Hixton, UK (2024) Keywords: AMR antibioticaresistentie Health data Surveillance Whole ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Whole-genome sequencing has become the method of choice for bacterial outbreak investigation, with most clinical and public health laboratories currently routinely using short-read Illumina sequencing. Recently, ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Whole-genome sequencing has become the method of choice for bacterial outbreak investigation, with most clinical and public health laboratories currently routinely using short-read Illumina sequencing. Recently, ...
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
Whole-genome sequencing has become the method of choice for bacterial outbreak investigation, with most clinical and public health laboratories currently routinely using short-read Illumina sequencing. Recently, ...