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Preparing cDNA Libraries from Lytic Phage-Infected Cells for Whole Transcriptome Analysis by RNA-Seq.

Bacteriophage RNA-seq Abstract: Whole genome wide analysis of transcription using RNA-Seq methods is a powerful way to elucidate differential expression of gene features in bacteria across different conditions as ...

High coverage metabolomics analysis reveals phage-specific alterations to Pseudomonas aeruginosa physiology during infection.

bacteriophages from six distinct phage genera. Analysis of the metabolomics data indicates an active interference in the host metabolism. In general, phages elicit an increase in pyrimidine and nucleotide sugar ...

Structural elucidation of a novel mechanism for the bacteriophage-based inhibition of the RNA degradosome.

Publication Type: Peer reviewed scientific article Authors: An Van den Bossche; Hardwick, Steven W; Pieter-Jan Ceyssens; Hendrix, Hanne; Voet, Marleen; Dendooven, Tom; Bandyra, Katarzyna J; De Maeyer, Marc; Aertsen, Abram; Noben, Jean-Paul; Luisi, Ben F; ...

Scalable chromatography-based purification of virus-like particle carrier for epitope based influenza A vaccine produced in Escherichia coli.

chromatography-based, scalable purification protocol for the purification of a VLP-based influenza A vaccine produced in Escherichia coli. Recombinant VLP s derived from the RNA bacteriophage MS2 displaying an epitope ...

Experimental evidence for proteins constituting virion components and particle morphogenesis of bacteriophage ZF40.

363, Issue 6 (2016) Keywords: Bacteriophages Capsid Proteins Gene Order Genome, Viral Open Reading Frames Proteome Viral Proteins Virion Abstract: Bacteriophage ZF40 is the only currently available, ...

The search for therapeutic bacteriophages uncovers one new subfamily and two new genera of Pseudomonas-infecting Myoviridae.

Abstract: In a previous study, six virulent bacteriophages PAK_P1, PAK_P2, PAK_P3, PAK_P4, PAK_P5 and CHA_P1 were evaluated for their in vivo efficacy in treating Pseudomonas aeruginosa infections using ...

Genetic diversity of Shiga toxin-producing Escherichia coli O157 : H7 recovered from human and food sources.

characterization included: lineage-specific polymorphism assay (LSPA-6), clade typing, tir (A255T) polymorphism, Shiga toxin-encoding bacteriophage insertion site analysis and variant analysis of Shiga toxin 2 gene ...

Functional elucidation of antibacterial phage ORFans targeting Pseudomonas aeruginosa

Lavigne,R. Source: Cell Microbiol., Volume 16, Issue 12, Number 1835, p.1822- 1835 (2014) Keywords: a an analysi analysis article AS bacteria Bacteriophages Belgium Climate Database Databases Dna electronic ...

Systematic identification of hypothetical bacteriophage proteins targeting key protein complexes of pseudomonas aeruginosa

Minakhin,L.; Severinov,K.; J.P. Noben; Lavigne,R. Source: Journal of Proteome Research, Volume 13, Issue 10, Number 4456, p.4446- 4456 (2014) Keywords: Bacteriophages MALDI-TOF MS Pseudomonas aeruginosa ...

Development of giant bacteriophage phiKZ is independent of the host transcription apparatus

Journal of Virology, Volume 88, Issue 18, Number 10510, p.10501- 10510 (2014) Keywords: 0 Absence Activity article Bacterial Proteins Bacteriophages Belgium Beta Biology Cell data Development DNA-Directed ...

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