Search results - 174 results
Shifting national surveillance of Shigella infections toward geno-serotyping by the development of a tailored Luminex assay and NGS workflow.
respectively. All discrepancies were analyzed with whole-genome sequencing and shown to be related to causative mutations (stop codons, indels, and promoter mutations) in glycosyltransferase genes. This ...
Study of the underlying mechanisms and consequences of pathogenicity differences between two in vitro selected G1-H9N2 clones originating from a single isolate.
Volume 50, Issue 1 (2019) Keywords: Animals Chickens Gene Expression Regulation Genome, Viral Hemagglutination Inhibition Tests Immunity, Innate In Vitro Techniques Influenza A Virus, H9N2 Subtype ...
Status and potential of bacterial genomics for public health practice: a scoping review
infectious diseases Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: ...
Occurrence and identification of spore-forming bacteria in skim-milk powders
manufacturing environments. Using whole genome sequencing, 16 of 23 isolates identified as B. licheniformis by 16S sequencing were confirmed as B. licheniformis, four were identified as Bacillus ...
Genome Sequences of Livestock-Associated Methicillin-Resistant Staphylococcus aureus spa Type t899 Strains Belonging to Three Different Sequence Types (ST398, ST9, and ST4034).
report, we present the draft genome sequences of nine LA- MRSA strains. These strains were isolated from meat and a human nasal swab sample and belong to one unique type (t899), but to three different ...
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna (Gracula religiosa)
Publication Type: Peer reviewed scientific article Authors: Steven Van Borm; Bénédicte Lambrecht; Frank Vandenbussche; Mieke Steensels Source: Genome Announcements, Volume 5, Issue 12 (2017) Health ...
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna (Gracula religiosa)
Publication Type: Peer reviewed scientific article Authors: Steven Van Borm; Bénédicte Lambrecht; Frank Vandenbussche; Mieke Steensels Source: Genome Announcements, Volume 5, Issue 12 (2017) Health ...
Seasonal Genetic Drift of Human Influenza A Virus Quasispecies Revealed by Deep Sequencing
determine the whole genome genetic heterogeneity of the three categories of influenza A viruses that circulated in humans between 2007 and 2012 in France, directly from clinical respiratory specimens. ...
Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing
Publication Type: Peer reviewed scientific article Authors: The CRyPTIC Consortium and the 100000 Genomes Project; Allix-Béguec, Caroline; Irena Arandjelovic; Bi, Lijun; Patrick Beckert; Maryline ...
Application of whole genome data for in silico evaluation of primers and probes routinely employed for the detection of viral species by RT-qPCR using dengue virus as a case study.
real-time polymerase chain reaction (RT-qPCR) directed against genomic regions conserved between different isolates. Genetic variation can however result in mismatches of primers and probes with their ...