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BSFM 2023- L. monocytogenes in Plant-Based Foods: insights from of a recent foodborne outbreak linked to vegan alternative to cheese
Koenraad Source: BSFM, Belgian Society for Food Microbiology (BSFM), Brussels, Belgium (2023) Keywords: foodborne outbreak foodborne outbreak investigation Listeria monocytogenes Abstract: Introduction ...
Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling
Keersmaecker Source: BSFM, BSFM, Brussels, Belgium (2023) Keywords: adaptive sampling nanopore outbreak investigation shotgun metagenomics Abstract: Introduction Traditionally, the investigation of suspect food ...
Keeping our food safe: the use of sequencing technologies for foodborne outbreak investigations
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: BRIAS, BRIAS, Issue ULB, Brussels, Belgium (2023) Keywords: Food Safety foodborne outbreaks ...
Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
had only rarely been associated with human cases of an outbreak, let alone during a real outbreak. Therefore, this PhD centered on the development of shotgun metagenomics methods to study ...
ESCAIDE 2022 Oral presentation: International outbreak of Salmonella Typhimurium linked to a chocolate factory in 2022: Belgian findings
Salmonella Typhimurium infections. Epidemiological and traceback investigations revealed a multi-country outbreak linked to chocolate products from a Belgian factory of an international brand. Microbiological ...
Introduction of WGS in food microbiology: advantages and challenges
Keywords: antimicrobial resistance (AMR) Food Safety foodborne outbreak investigation Monitoring SciCom Whole genome sequencing (WGS) Abstract: In October 2021 the Scientific Committee of the Federal Agency ...
Shotgun metagenomics for strain-level food-borne outbreak investigation
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers Source: FoodMicro (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in appli ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
conventional methods in e.g. the field of pathogen detection/characterization along the food chain, starting from the food production environment (including detection of AMR genes) until foodborne outbreak ...
Development, evaluation and optimization of next generation sequencing data analysis tools in support of a fast response for public health and food chain safety
Publication Type: Dissertation Authors: Assia Saltykova Source: Ghent University, Ghent, Belgium, p.308 (2022) Keywords: bioinformatics tools Database GMO Metagenomics NGS outbreak investigation ...
Towards a new (H)ERA: Preparedness for outbreak detection and response
national, cross-border, or pandemic outbreaks of infectious diseases. The HERA-Incubator, funded by the European Centre for Disease Prevention and Control (ECDC), allows investments to upscale the national ...