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Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety

characterization had only been achieved in a handful of studies, and had not been proven possible when more than one strain of the same species were present. Moreover, the genome obtained from metagenomics sequences ...

Shotgun metagenomics as a ONE Health tool for better protecting human health

food-borne outbreak that occurred in Belgium in 2019. Discussion: By applying the shotgun metagenomics approach to specific case studies, we delivered proof-of-concepts and demonstrated its added value ...

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