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Résultats de la recherche - 30 results
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Florence Crombé; Klara De Rauw; Denis Piérard; Kathleen Marchal; Kevin ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates
Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Piérard, Denis; Marchal, Kathleen; Nancy Roosens; Kevin Vanneste; Sigrid ...
Targeting the 16S rRNA gene for bacterial identification in complex mixed samples: comparative evaluation of second (Illumina) and third (Oxford Nanopore Technologies) generation sequencing technologies.
Publication Type: Peer reviewed scientific article Authors: Raf Winand; Bert Bogaerts; Stefan Hoffman; Lefèvre, Loic; Delvoye, Maud; Julien Van Braekel; Fu, Qiang; Nancy Roosens; Sigrid C.J. De ...
Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: as a Proof-of-Concept.
Publication Type: Peer reviewed scientific article Authors: Bert Bogaerts; Raf Winand; Fu, Qiang; Julien Van Braekel; Pieter-Jan Ceyssens; Wesley Mattheus; Sophie Bertrand; Sigrid C.J. De ...
Shifting national surveillance of Shigella infections toward geno-serotyping by the development of a tailored Luminex assay and NGS workflow.
Publication Type: Peer reviewed scientific article Authors: Eleonora Ventola; Bert Bogaerts; Sigrid C.J. De Keersmaecker; Kevin Vanneste; Nancy Roosens; Wesley Mattheus; Pieter-Jan Ceyssens Source: ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.
Publication Type: Peer reviewed scientific article Authors: Stéphanie Nouws; Bert Bogaerts; Bavo Verhaegen; Sarah Denayer; Piérard, Denis; Marchal, Kathleen; Nancy Roosens; Kevin Vanneste; Sigrid ...
Evaluation of WGS performance for bacterial pathogen characterization with the Illumina technology optimized for time-critical situations.
Publication Type: Peer reviewed scientific article Authors: Bert Bogaerts; Raf Winand; Julien Van Braekel; Stefan Hoffman; Nancy Roosens; Sigrid C.J. De Keersmaecker; Marchal, Kathleen; Kevin ...
Whole-genome-based phylogenomic analysis of the Belgian 2016-2017 influenza A(H3N2) outbreak season allows improved surveillance.
Publication Type: Peer reviewed scientific article Authors: Laura Van Poelvoorde; Bert Bogaerts; Fu, Qiang; Sigrid C.J. De Keersmaecker; Isabelle Thomas; Nina Van Goethem; Steven Van Gucht; Raf ...
Isolation of Drug-Resistant Gallibacterium anatis from Calves with Unresponsive Bronchopneumonia, Belgium.
Publication Type: Peer reviewed scientific article Authors: Van Driessche, Laura; Kevin Vanneste; Bert Bogaerts; Sigrid C.J. De Keersmaecker; Nancy Roosens; Haesebrouck, Freddy; Lieze De Cremer; ...
Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing.
Publication Type: Peer reviewed scientific article Authors: Marie-Alice Fraiture; Bert Bogaerts; Raf Winand; Marie Deckers; N. Papazova; Kevin Vanneste; Sigrid C.J. De Keersmaecker; Nancy Roosens ...