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Transversal activities in applied genomics
Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: as a Proof-of-Concept.
Shifting national surveillance of Shigella infections toward geno-serotyping by the development of a tailored Luminex assay and NGS workflow.
Application of whole genome data for in silico evaluation of primers and probes routinely employed for the detection of viral species by RT-qPCR using dengue virus as a case study.
A multiplex oligonucleotide ligation-PCR method using the Luminex technology for the geno-serotyping of the most common Salmonella in Belgium
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,,12:i:.
Next Generation Sequencing and Bioinformatics for Public Health
Development and application of next-generation sequencing (NGS) and metagenomics to improve influenza surveillance and pandemic preparedness in Belgium
More rapid and accurate identification of (zoonotic) Salmonella serotypes that are the object of official control in poultry and pork
Human genomic biomarker RTqPCR array for optimised and mechanistically-based genotoxicity assessment
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