Résultats de la recherche - 3 results
Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling
a proof-of-concept, we explored the use of adaptive sampling using various databases (depletion of the food matrix i.e. potato, enrichment of a selection of foodborne pathogens, enrichment of a database of ...
Development, evaluation and optimization of next generation sequencing data analysis tools in support of a fast response for public health and food chain safety
Publication Type: Dissertation Authors: Assia Saltykova Source: Ghent University, Ghent, Belgium, p.308 (2022) Keywords: bioinformatics tools Database GMO Metagenomics NGS outbreak investigation ...
Development of a genoserotyping system for the identification of Salmonella serotypes
Typhimurium including its monophasic variant 1,4,[5],12:i:- and S. Virchow. Secondly, molecular markers specific to the targeted serotypes were selected from Salmonella EnteroBase (a database with the MLST ...