Résultats de la recherche - 9 results
Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
have always been analyzed and characterized after isolation. Since the advent of second generation sequencing, it has been possible to characterize the complete genome of these isolates to the SNP level. ...
Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteriaAbstractBackgroundResultsConclusion
Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Bram Bloemen; Kevin Vanneste; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: BMC Genomics, Volume 24, Issue 1 (2023) ...
Report on an initial assessment of long-read sequencing for metagenome (community and AMR) analysis (defined community, spiked and real simple and complex matrices) and comparison to current short-read standard
applied genomics Manuscript versions: DOI: https://doi.org/10.5281/zenodo.7429361 Full text language: English Category: Scientific reports, recommendations, guidance documents, directives and ...
Report on the feasibility of using Hi-C sequencing for metagenomics to define the context of AMR genes
Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: https://doi.org/10.5281/zenodo.7433351 ...
Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities
Santé et environnement Gezondheid en milieu Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript ...
Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens
et environnement Gezondheid en milieu Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript ...
Detection and identification of authorized and unauthorized GMOs using high-throughput sequencing with the support of a sequence-based GMO database
–veiligheid Santé et environnement Gezondheid en milieu Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics ...
Review on current scientific literature and overview of commercially available methods for on-site DNA isolation
environnement Gezondheid en milieu Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: ...
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:.
Salmonella; Salmonella enterica; Salmonella typhimurium; SNP; subtyping; whole genome sequencing Abstract: Whole genome sequencing represents a promising new technology for subtyping of bacterial pathogens. ...