Résultats de la recherche - 17 results
Using a combination of short- and long-read sequencing to investigate the diversity in plasmid- and chromosomally encoded extended-spectrum beta-lactamases (ESBLs) in clinical Shigella and Salmonella isolates in Belgium
Publication Type: Peer reviewed scientific article Authors: Berbers, Bas; Vanneste, Kevin; Roosens, Nancy H. C. J.; Marchal, Kathleen; Pieter-Jan Ceyssens *; De Keersmaecker, Sigrid C. J. Source: ...
be.Prepared to increase Belgian integration of health data as a way of strengthening preparedness for infectious diseases
Nancy Roosens; Philippe Herman; Ruben Brondeel; Koen Blot; Karin De Ridder; Kevin Vanneste; Dieter Van Cauteren Source: ESCMID Global 2024, ESCMID Global 2024, Barcelona (2024) Keywords: epidemiology ...
Report on an initial assessment of long-read sequencing for metagenome (community and AMR) analysis (defined community, spiked and real simple and complex matrices) and comparison to current short-read standard
Otani; Giuliano Garofolo; Marco Di Domenico; Valeria Michelacci; Bosco R Matamoros; Carlus Deneke; Lisa Di Marcantonio; Francesca Marotta; Jennie Fischer; Bram Bloemen; Kevin Vanneste; Nancy Roosens; ...
Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance.
Publication Type: Peer reviewed scientific article Authors: Laura Van Poelvoorde; Kevin Vanneste; Sigrid C.J. De Keersmaecker; Isabelle Thomas; Nina Van Goethem; Steven Van Gucht; Saelens, Xavier; ...
Strategy and Performance Evaluation of Low-Frequency Variant Calling for SARS-CoV-2 Using Targeted Deep Illumina Sequencing
Vanneste Source: Frontiers in Microbiology, Volume 12 (2021) Keywords: co-infection Illumina NGS quasispecies SARS-CoV-2 variant of concern wastewater surveillance Abstract: The ongoing COVID-19 pandemic, ...
Whole-Genome Sequencing-Based Antimicrobial Resistance Characterization and Phylogenomic Investigation of 19 Multidrug-Resistant and Extended-Spectrum Beta-Lactamase-Positive Escherichia coli Strains Collected From Hospital Patients in Benin in 2019.
Dissou; Simon, Anne; Francis Moise Dossou; Kevin Vanneste; Olivia Dalleur Source: Front Microbiol, Volume 12 (2021) Abstract: The increasing worldwide prevalence of extended-spectrum beta-lactamase (ESBL) ...
Key considerations for the implementation of high throughput sequencing based metagenomics (mNGS) in diagnostic clinical, food and veterinary labs: a no-nonsense pointer. the Metastava consortium
Vanneste; Michael Peeters; Steven Van Gucht; Yannick Blanchard; Nicole Pavio; Sandra Martin-Latil; Fabrice Touzain; Isabelle Kempf; Liu, Lihong; Mickhayil Hakhverdyan; Mikael Leijon; Alex Bossers; van der ...
Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation.
Vanneste; Pieter-Jan Ceyssens Source: Microorganisms, Volume 9, Issue 4 (2021) Abstract: Shigellosis is an acute enteric infection caused mainly by the species and. Since surveillance of these pathogens ...
First detection of a plasmid-encoded New-Delhi metallo-beta-lactamase-1 (NDM-1) producing Acinetobacter baumannii using whole genome sequencing, isolated in a clinical setting in Benin.
Publication Type: Peer reviewed scientific article Authors: Carine Yehouenou; Bert Bogaerts; Kevin Vanneste; Nancy Roosens; Sigrid C.J. De Keersmaecker; Marchal, Kathleen; Affolabi, Dissou; Reza ...
First detection of a plasmid located carbapenem resistant blaVIM-1 gene in E. coli isolated from meat products at retail in Belgium in 2015
Publication Type: Peer reviewed scientific article Authors: Cristina Garcia-Graells; Bas Berbers; Bavo Verhaegen; Kevin Vanneste; Marchal, Kathleen; Nancy Roosens; N Botteldoorn; Sigrid C.J. De ...