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Résultats de la recherche - 14 results

A bioinformatics WGS workflow for clinical complex isolate analysis, validated using a reference collection extensively characterized with conventional methods and approaches.

Keersmaecker; Nancy Roosens; Marchal, Kathleen; Vanessa Mathys; Vanneste, Kevin Source: J Clin Microbiol (2021) Abstract: The use of whole genome sequencing (WGS) for routine typing of bacterial isolates has ...

Deepening of In Silico Evaluation of SARS-CoV-2 Detection RT-qPCR Assays in the Context of New Variants

Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Vanneste, Kevin; Isabelle Thomas; Steven Van Gucht; Capron, Arnaud; Philippe Herman; Nancy Roosens; Sigrid De Keersmaecker ...

Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.

Publication Type: Peer reviewed scientific article Authors: Berbers, Bas; Pieter-Jan Ceyssens *; Bogaerts, Pierre; Vanneste, Kevin; Nancy Roosens; Marchal, Kathleen; Sigrid De Keersmaecker Source: ...

A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.

Publication Type: Peer reviewed scientific article Authors: Buytaers, Florence E; Saltykova, Assia; Denayer, Sarah; Verhaegen, Bavo; Vanneste, Kevin; Nancy Roosens *; Piérard, Denis; Marchal, ...

Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.

Publication Type: Peer reviewed scientific article Authors: Mathieu Gand; Vanneste, Kevin; Isabelle Thomas; Steven Van Gucht; Capron, Arnaud; Philippe Herman; Nancy Roosens; Sigrid De Keersmaecker ...

The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.

Vanneste, Kevin; Nancy Roosens; Sigrid De Keersmaecker Source: Foods, Volume 9, Issue 8 (2020) Keywords: Food Safety foodborne outbreak investigation Shiga toxin-producing Escherichia coli STEC Surveillance ...

Food Chemistry, Function and AnalysisDNA Techniques to Verify Food Authenticity CHAPTER 8. GMO Detection and Identification Using Next-generation Sequencing

Publication Type: Scientific book or chapter Authors: Marie-Alice Fraiture *; Nina Papazova; Kevin Vanneste *; Sigrid De Keersmaecker; Nancy Roosens * Source: Royal Society of Chemistry, Cambridge, ...

Strategy for the identification of micro-organisms producing food and feed products: Bacteria producing food enzymes as study case

Publication Type: Peer reviewed scientific article Authors: Marie Deckers; Kevin Vanneste *; Raf Winand; De Keersmaecker Sigrid; S. Denayer; Marc Heyndrickx; Dieter Deforce; Marie-Alice Fraiture *; ...

Shifting national surveillance of Shigella infections toward geno-serotyping by the development of a tailored Luminex assay and NGS workflow.

Publication Type: Peer reviewed scientific article Authors: Ventola, Eleonora; Bogaerts, Bert; Sigrid C.J. De Keersmaecker; Vanneste, Kevin; Nancy Roosens; Wesley Mattheus; Ceyssens, Pieter-Jan ...

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