Résultats de la recherche - 4 results
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
demonstrating a data analysis approach for detailed characterization and phylogenetic placement of multiple bacterial strains of one species from shotgun metagenomic WGS data of an enriched food sample. Health ...
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
human cases, demonstrating the power of shotgun metagenomics for rapid outbreak investigation and source tracking. Health Topics: E. coli pathogènes (toxi-)infection alimentaire (TIA) Pathogene E. coli ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
genotypes. Besides a universal, all-in-one workflow with less hands-on-time (five versus seven actual working days for WGS versus conventional), WGS-based cgMLST-typing demonstrated increased resolution. This ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.
its potential. Health Topics: Pathogene E. coli Pathogenic E. coli E. coli pathogènes Food-borne illness Voedseltoxi-infecties (toxi-)infection alimentaire (TIA) Service: Pathogènes alimentaires ...