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Résultats de la recherche - 14 results

Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities

Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Manal AbuOun; Saria Otani; Indre Navickaite; Mathieu Gand; Bram Bloemen; Kevin Vanneste; Valeria Michelacci; Bosco Rodríguez Matamoros; Nancy Roosens; Sigrid C.J. De ...

Fluoroquinolone resistance in Escherichia coli isolates after exposure to non-fluoroquinolone antibiotics: a retrospective case–control study

Abstract: Objectives To investigate whether prior exposure to non-fluoroquinolone antibiotics increases the risk of fluoroquinolone resistance in Escherichia coli. Methods This was a secondary analysis of ...

Genomic epidemiology of emerging ESBL-producing Kentucky in Europe.

this clone. We dated the origin of the clone to approximately 2005 in Northern Africa, most likely in Egypt. The geographic origin predicted by the phylogenetic analysis is consistent with the patients’ ...

Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs.

phenotypes undetected by Deeplex Myc- TB had known resistance-associated mutations by WGS analysis outside Deeplex Myc- TB targets. Phenotype predictions from Deeplex Myc- TB analysis directly on 109 sputa ...

Time trend of prevalence and susceptibility to nitrofurantoin of urinary MDR Escherichia coli from outpatients

nitrofurantoin, i.e. first-line treatment for uncomplicated urinary tract infections (UTI s), of urinary MDR E. coli (2005 versus 2011-12). Methods: In this secondary analysis of a multicentre study, which ...

Attributable deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in the EU and the European Economic Area in 2015: a population-level modelling analysis

Publication Type: Peer reviewed scientific article Authors: Alessandro Cassini; Liselotte Diaz Högberg; Diamantis Plachouras; Annalisa Quattrocchi; Ana Hoxha; Gunnar Skov Simonsen; Mélanie Colomb-Cotinat; Mirjam E Kretzschmar; Brecht Devleesschauwer; Mich ...

Comparative genomics of quinolone-resistant and susceptible Campylobacter jejuni of poultry origin from major poultry producing European countries (GENCAMP)

different phylogenetic methods, ranging from single nucleotide polymorphisms analysis to gene-by-gene approaches such as rMLST, cgMLST, wgMLST and core genome tree, provided concordant results, but it is not ...

The search for therapeutic bacteriophages uncovers one new subfamily and two new genera of Pseudomonas-infecting Myoviridae.

and 25% proteins considered homologous between the two clades. By ESI- MS / MS analysis we determined that their virions are composed of at least 25 different proteins and electron microscopy revealed ...

Muticentrische studie "Verband tussen antibioticaconsumptie en microbile resistentie bij de individuele patiënt"

Ratios). A total of 105,198 samples, originating from 16 laboratories and 44,365 patients matched the criteria for further analysis through subsets of combinations of microorganisms and susceptibility ...

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