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Use of a Whole Genome Sequencing-based approach for Mycobacterium tuberculosis surveillance in Europe in 2017-2019: an ECDC pilot study.

including both core genome multilocus sequence typing (cgMLST), and single nucleotide polymorphism (SNP)-based calculation of distances on all WGS data that fulfilled minimum quality criteria to ensure data ...

Listeria surveillance in Belgium

collection from 2010 until 2017 both classical data (MLST and PFGE) as cgMLST data are available. Of all confirmed L. monocytogenes cases in humans, serotypes ½a and 4b are most frequently observed. During the ...

The key role of WGS-based surveillance of Listeria monocytogenes in both human and food isolates in outbreak investigations

Hoorde; Bavo Verhaegen Source: 26th Conference on Food Microbiology, BSFM, Issue BSFM, Brussels, Belgium (2022) Keywords: cgMLST Listeria monocytogenes NGS outbreak Health Topics:  Health and disease ...

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