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Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus.

circulation of vaccine-like recombinants, and the use of vaccines. The slow molecular evolution of its DNA genome limits the utility of genetic variation for accurate tracing based on evolutionary analyses, but ...

Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus.

circulation of vaccine-like recombinants, and the use of vaccines. The slow molecular evolution of its DNA genome limits the utility of genetic variation for accurate tracing based on evolutionary analyses, but ...

A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa.

Drug Resistance, Microbial Genomics Humans Salmonella Infections Salmonella typhimurium Abstract: Invasive non-typhoidal Salmonella (iNTS) disease manifesting as bloodstream infection with high mortality ...

BSFM 2023- L. monocytogenes in Plant-Based Foods: insights from of a recent foodborne outbreak linked to vegan alternative to cheese

following ISO 11290 – 1 and – 2. A human strain was collected at the NRC Listeria. All isolated strains underwent serotyping for further characterisation at the NRC Listeria, and Whole Genome Sequencing (WGS) ...

Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling

adaptive sampling, following whole genome amplification to increase the amount of genetic material to meet sequencing standards. The strain-level data analysis was performed as previously described (Buytaers ...

Genomic monitoring of SARS-CoV-2 variants using sentinel SARI hospital surveillance.

Issue 10 (2023) Keywords: COVID-19 Genomics hospitals Humans Pandemics Pneumonia SARS-CoV-2 Sentinel Surveillance Abstract: BACKGROUND: To support the COVID-19 pandemic response, many countries, including ...

RNA sequencing of avian paramyxovirus (Paramyxoviridae, Avulavirinae) isolates from wild mallards in Belgium, 2021: complete genomes and coinfections.

RNA sequencing to characterize three Avulavirinae isolates from pooled samples obtained from wild mallards in Belgium in 2021. The complete genome sequences of two avian Orthoavulavirus-1 (AOAV-1) ...

Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin.

Staphylococcus aureus whole-genome sequencing. Abstract: Methicillin-resistant (MRSA) constitutes a serious public health concern, with a considerable impact on patients’ health, and substantial healthcare costs. ...

Whole-Genome Sequence Approach and Phylogenomic Stratification Improve the Association Analysis of Mutations With Patient Data in Influenza Surveillance

applied genomics Manuscript versions:  File:  Version:  Published Full text access:  Public Access Full text language:  English Category:  A1 FOS Classification:  3.04 Medical biotechnology ...

Detection of food and feed plant products obtained by targeted mutagenesis and cisgenesis

Laboratories, Volume JRC133689, Luxembourg (2023) Service:  Activités transversales en génomique appliquée Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Full text ...

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