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BY-COVID D5.1 Enriched report viral variants and health outcomes
(e.g., socioeconomic and genomic), new data sources (e.g., registries, bio-samples, surveillance systems), new sites (e.g., other countries), and new hypotheses (e.g., COVID-19 Disease Maps). Health ...
QC as a basis for human application of phage therapy in Belgium
active pharmaceutical ingredients (API) in a magistral preparation, specifically designed for an individual patient. The process necessitates the certification of the product, which includes a genomic ...
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
Kevin Vanneste Source: Frontiers in Microbiology, Volume 14 (2023) Keywords: Bacillus cereus Food Additives riboflavin Surveillance whole-genome sequencing Abstract: Bacillus cereus is a spore-forming ...
Unraveling clonal CD8 T cell expansion and identification of essential factors in γ-herpesvirus-induced lymphomagenesis.
genome maintenance in infected CD8 T lymphocytes but the exact mechanism(s) leading to lymphoproliferation and MCF remained unknown. To decipher how AlHV-1 dysregulates T lymphocytes, we first examined the ...
Pilot market surveillance of GMM contaminations in alpha-amylase food enzyme products: A detection strategy strengthened by a newly developed qPCR method targeting a GM producing alpha-amylase.
Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Full text language: English Category: Peer-reviewed scientific articles FOS Classification: 1.6 Biological sciences ...
Targeted Whole Genome Sequencing of the Capripoxvirus Genome from Clinical Tissue Samples and Lyophilized Vaccine Batches.
achieved by whole-genome sequencing. In this chapter, we describe a robust, cost-effective, and widely applicable protocol for reconstructing (nearly) complete CaPV genomes directly from clinical samples or ...
Real-time cluster detection of Listeria to enhance outbreak investigation in Belgium
Next-Generation sequencing. The obtained data are analysed using an in-house Listeria pipeline (v1.2) in Galaxy, which amongst other analyses performs cgMLST (core genome MultiLocus Sequence Typing) based on the ...
Antimicrobial resistance in ESBL and indicator E. coli, Campylobacter spp.,Salmonella spp., methicillin-resistant Staphylococcus aureus (MRSA) and Enterococcus faecalis and faecium isolated from food and food-producing animals (primary production) in 2023
resistance levels are lower in C. jejuni than in C. coli. In 2023, Salmonella spp. recovered from food matrices have been analysed by whole genome sequencing (WGS). The highest levels of predicted ...
Genomic comparison between and and analysis of peptide-based biomarkers for serodiagnosis.
Fretin, David; Marché, Silvie Source: Front Vet Sci, Volume 11 (2024) Keywords: Antigens B-cell epitopes Diagnosis Mycobacterium bovis Mycobacterium microti Tuberculosis whole-genome sequencing Abstract: In ...
High pathogenic avian influenza A(H5) viruses of clade 2.3.4.4b in Europe-Why trends of virus evolution are more difficult to predict.
the largest epidemics recorded so far, this clade has begun to circulate endemically in European wild bird populations. This study used the complete genomes of 1,956 European HPAI A(H5N x) viruses to ...