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2024
Targeted Whole Genome Sequencing of the Capripoxvirus Genome from Clinical Tissue Samples and Lyophilized Vaccine Batches., Mathijs, Elisabeth, and Vandenbussche Frank , Methods Mol Biol, 2024, Volume 2732, (2024)
2023
Combined Phylogeographic Analyses and Epidemiologic Contact Tracing to Characterize Atypically Pathogenic Avian Influenza (H3N1) Epidemic, Belgium, 2019., Van Borm, Steven, Boseret Geraldine, Dellicour Simon, Steensels Mieke, Roupie Virginie, Vandenbussche Frank, Mathijs Elisabeth, Vilain Aline, Driesen Michèle, Dispas Marc, et al. , Emerg Infect Dis, 2023 Feb, Volume 29, Issue 2, (2023)
Combined Phylogeographic Analyses and Epidemiologic Contact Tracing to Characterize Atypically Pathogenic Avian Influenza (H3N1) Epidemic, Belgium, 2019, Van Borm, Steven, Boseret Geraldine, Dellicour Simon, Steensels Mieke, Roupie Virginie, Vandenbussche Frank, Mathijs Elisabeth, Vilain Aline, Driesen Michèle, Dispas Marc, et al. , Emerging Infectious Diseases, Jan-02-2023, Volume 29, Issue 2, (2023)
Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus., Van Borm, Steven, Dellicour Simon, Martin Darren P., Lemey Philippe, Agianniotaki Eirini I., Chondrokouki Eleni D., Dejan Vidanovic, Vaskovic Nikola, Petroviċ Tamaš, Laziċ Sava, et al. , J Virol, 2023 Oct 31, (2023)
Complete genome reconstruction of the global and European regional dispersal history of the lumpy skin disease virus., Van Borm, Steven, Dellicour Simon, Martin Darren P., Lemey Philippe, Agianniotaki Eirini I., Chondrokouki Eleni D., Dejan Vidanovic, Vaskovic Nikola, Petroviċ Tamaš, Laziċ Sava, et al. , J Virol, 2023 Oct 31, (2023)
2022
Recombinant LSDV Strains in Asia: Vaccine Spillover or Natural Emergence?, Vandenbussche, Frank, Mathijs Elisabeth, Philips Wannes, Meruyert Saduakassova, De Leeuw Ilse, Akhmetzhan Sultanov, Haegeman Andy, and De Clercq Kris , Viruses, Jan-07-2022, Volume 14, Issue 7, (2022)
A robust, cost-effective and widely applicable whole-genome sequencing protocol for capripoxviruses, Mathijs, Elisabeth, Haegeman Andy, De Clercq Kris, Van Borm Steven, and Vandenbussche Frank , Journal of Virological Methods, Jan-01-2022, (2022)
2021
Coding-Complete Sequences of Recombinant Lumpy Skin Disease Viruses Collected in 2020 from Four Outbreaks in Northern Vietnam., Mathijs, Elisabeth, Vandenbussche Frank, Long Nguyen, Aerts Laetitia, Tho Nguyen, De Leeuw Ilse, Minh Quang, Dang Nguyen, Hoang, Philips Wannes, Vui Dam, Thi, et al. , Microbiol Resour Announc, 2021 Dec 02, Volume 10, Issue 48, (2021)
Key considerations for the implementation of high throughput sequencing based metagenomics (mNGS) in diagnostic clinical, food and veterinary labs : a no-nonsense pointer. the Metastava consortium, Van Borm, Steven, Vandenbussche Frank, De Clercq Kris, Haegeman Andy, De Keersmaecker Sigrid C. J., Vanneste Kevin, Peeters Michael, Van Gucht Steven, Blanchard Yannick, Pavio Nicole, et al. , 2021, (2021)
Metagenomic sequencing determines complete infectious bronchitis virus (avian Gammacoronavirus) vaccine strain genomes and associated viromes in chicken clinical samples., Van Borm, Steven, Steensels Mieke, Mathijs Elisabeth, Vandenbussche Frank, van den Berg Thierry, and Lambrecht Bénédicte , Virus Genes, 2021 Dec, Volume 57, Issue 6, (2021)
Nearly Complete Genome Sequences of Two Bluetongue Viruses Isolated during the 2020 Outbreak in the Grand Duchy of Luxembourg., Vandenbussche, Frank, Bourg Manon, Mathijs Elisabeth, Lefebvre David, De Leeuw Ilse, Haegeman Andy, Aerts Laetitia, Van Borm Steven, and De Clercq Kris , Microbiol Resour Announc, 2021 Apr 08, Volume 10, Issue 14, (2021)
WGS- versus ORF5-Based Typing of PRRSV: A Belgian Case Study., Vandenbussche, Frank, Mathijs Elisabeth, Tignon Marylène, Vandersmissen Tamara, and Cay Ann Brigitte , Viruses, 2021 Dec 02, Volume 13, Issue 12, (2021)
2020
Complete Coding Sequence of a Lumpy Skin Disease Virus from an Outbreak in Bulgaria in 2016., Mathijs, Elisabeth, Vandenbussche Frank, Ivanova Emiliya, Haegeman Andy, Aerts Laetitia, De Leeuw Ilse, Van Borm Steven, and De Clercq Kris , Microbiol Resour Announc, 2020 Oct 22, Volume 9, Issue 43, (2020)
Complete Coding Sequence of a Lumpy Skin Disease Virus Strain Isolated during the 2016 Outbreak in Kazakhstan., Mathijs, Elisabeth, Vandenbussche Frank, Saduakassova Meruyert, Kabduldanov Tursyn, Haegeman Andy, Aerts Laetitia, Kyzaibayev Taskyn, Sultanov Akhmetzhan, Van Borm Steven, and De Clercq Kris , Microbiol Resour Announc, 2020 Jan 23, Volume 9, Issue 4, (2020)
Evaluation of a commercial exogenous internal process control for diagnostic RNA virus metagenomics from different animal clinical samples, Van Borm, Steven, Qiang Fu, Winand Raf, Vanneste Kevin, Hakhverdyan Mikhayil, Höper Dirk, and Vandenbussche Frank , Journal of Virological Methods, Jan-09-2020, Volume 283, (2020)
Increased viral read counts and metagenomic full genome characterization of porcine astrovirus 4 and Posavirus 1 in sows in a swine farm with unexplained neonatal piglet diarrhea, Van Borm, Steven, Vanneste Kevin, Qiang Fu, Maes Dominiek, Schoos Alexandra, Vallaey Eline, and Vandenbussche Frank , Virus Genes, Jan-12-2020, Volume 56, Issue 6, (2020)
2018
Complete Genome Sequences of Five Foot-and-Mouth Disease Viruses of Serotype A Isolated from Cattle in Nigeria between 2013 and 2015., Vandenbussche, Frank, Mathijs Elisabeth, Ularamu Hussaini G., Ehizibolo David O., Haegeman Andy, Lefebvre David, De Vleeschauwer Annebel, Van Borm Steven, and De Clercq Kris , Genome Announc, 2018 Feb 15, Volume 6, Issue 7, (2018)
2017
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna ()., Van Borm, Steven, Lambrecht Bénédicte, Vandenbussche Frank, and Steensels Mieke , Genome Announc, 2017 Mar 23, Volume 5, Issue 12, (2017)
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna (Gracula religiosa), Van Borm, Steven, Lambrecht Bénédicte, Vandenbussche Frank, and Steensels Mieke , Genome Announcements, Nov-03-2018, Volume 5, Issue 12, (2017)
Complete Coding Sequence of Usutu Virus Strain Gracula religiosa/U1609393/Belgium/2016 Obtained from the Brain Tissue of an Infected Captive Common Hill Myna (Gracula religiosa), Van Borm, Steven, Lambrecht Bénédicte, Vandenbussche Frank, and Steensels Mieke , Genome Announcements, Nov-03-2018, Volume 5, Issue 12, (2017)
Complete Genome Sequence of the Lumpy Skin Disease Virus Isolated from the First Reported Case in Greece in 2015, Agianniotaki, Eirini I., Mathijs Elisabeth, Vandenbussche Frank, Tasioudi Konstantia E., Haegeman Andy, Iliadou Peristera, Chaintoutis Serafeim C., Dovas Chrysostomos I., Van Borm Steven, Chondrokouki Eleni D., et al. , Genome Announcements, Aug-07-2018, Volume 5, Issue 29, (2017)
Complete Genome Sequences of Four Foot-and-Mouth Disease Viruses of Serotype South African Territories 1 (SAT 1), Topotype X, Isolated from Cattle in Nigeria in 2015, Vandenbussche, Frank, Mathijs Elisabeth, Ularamu Hussaini G., Ehizibolo David O., Haegeman Andy, Lefebvre David, Lazarus David D., Wungak Yiltawe S., De Vleeschauwer Annebel R., Van Borm Steven, et al. , Genome Announcements, Jul-10-2018, Volume 5, Issue 42, (2017)
Correction for Mathijs et al., Complete Genome Sequences of the Neethling-Like Lumpy Skin Disease Virus Strains Obtained Directly from Three Commercial Live Attenuated Vaccines, Mathijs, Elisabeth, Vandenbussche Frank, Haegeman Andy, King Alasdair, Nthangeni Bethuel, Potgieter Christiaan, Maartens Louis, Van Borm Steven, and De Clercq Kris , Genome Announcements, Sep-02-2017, Volume 5, Issue 6, (2017)
Laboratory validation of two real-time RT-PCR methods with 5'-tailed primers for an enhanced detection of foot-and-mouth disease virus., Vandenbussche, Frank, Lefebvre David, De Leeuw Ilse, Van Borm Steven, and De Clercq Kris , J Virol Methods, 2017 Aug, Volume 246, p.90-94, (2017)
Laboratory validation of two real-time RT-PCR methods with 5′-tailed primers for an enhanced detection of foot-and-mouth disease virus, Vandenbussche, Frank, Lefebvre David, De Leeuw Ilse, Van Borm Steven, and De Clercq Kris , Journal of Virological Methods, Jan-08-2017, Volume 246, (2017)

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