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2021
A molecular assay for rapidly distinguishing the AviPro SALMONELLA VAC T vaccine strain from wild-type field isolates, Ceyssens, Pieter-Jan, Van den Bossche An, Phan Lac Kim, Van Hoorde Koenraad, and Mattheus Wesley , Journal of Microbiological Methods, May-2021, Volume 184, (2021)
Outbreak of Central American born Shigella sonnei in two youth camps in Belgium in the summer of 2019, Van den Bossche, An, Ceyssens Pieter-Jan, Denayer Sarah, Hammami Naïma, van den Beld Maaike, Dallman Timothy J., and Mattheus Wesley , European Journal of Clinical Microbiology & Infectious Diseases , 2021 Feb 11, (2021)
Phage Biobank: Present Challenges and Future Perspectives., Lin, Ruby Cy, Sacher Jessica C., Ceyssens Pieter-Jan, Zheng Jan, Khalid Ali, and Iredell Jonathan R. , Curr Opin Biotechnol, 2021 04, Volume 68, (2021)
Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation., Bogaerts, Bert, Winand Raf, Van Braekel Julien, Mattheus Wesley, De Keersmaecker Sigrid C. J., Roosens Nancy, Marchal Kathleen, Vanneste Kevin, and Ceyssens Pieter-Jan , Microorganisms, 2021 Apr 06, Volume 9, Issue 4, (2021)
Retrospective evaluation of routine whole genome sequencing of Mycobacterium tuberculosis at the Belgian National Reference Center, 2019., Soetaert, Karine, Ceyssens Pieter-Jan, Boarbi Samira, Bogaerts Bert, Delcourt Thomas, Vanneste Kevin, De Keersmaecker Sigrid C. J., Roosens Nancy, Vodolazkaia Alexandra, Mukovnikova Marina, et al. , Acta Clin Belg, 2021 Nov 09, (2021)
Whole-genome sequencing for TB source investigations: principles of ethical precision public health., Van Rie, A, de Viedma D G., Meehan C, Comas I, Heupink T H, De Vos E, de Oñate W A, Mathys Vanessa, Ceyssens Pieter-Jan, Groenen G, et al. , Int J Tuberc Lung Dis, 2021 Mar 01, Volume 25, Issue 3, (2021)
2020
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination., Berbers, Bas, Ceyssens Pieter-Jan, Bogaerts Pierre, Vanneste Kevin, Roosens Nancy, Marchal Kathleen, and De Keersmaecker Sigrid C. J. , Antibiotics (Basel), 2020 Aug 11, Volume 9, Issue 8, (2020)
Genomic epidemiology of emerging ESBL-producing Kentucky in Europe., Coipan, Claudia E., Westrell Therese, van Hoeck Angela H. A. M., Alm Erik, Kotila Saara, Berbers Bas, De Keersmaecker Sigrid C. J., Ceyssens Pieter-Jan, Borg Maria Louise, Chattaway Marie, et al. , Emerg Microbes Infect, 2020 Dec, Volume 9, Issue 1, (2020)
The Phage-Encoded -Acetyltransferase Rac Mediates Inactivation of Transcription by Cleavage of the RNA Polymerase Alpha Subunit., Ceyssens, Pieter-Jan, De Smet Jeroen, Wagemans Jeroen, Akulenko Natalia, Klimuk Evgeny, Hedge Subray, Voet Marleen, Hendrix Hanne, Paeshuyse Jan, Landuyt Bart, et al. , Viruses, 2020 09 02, Volume 12, Issue 9, (2020)
2019
Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei., Hao, Chung The, Boinett Christine, Duy Pham Thanh, Jenkins Claire, Weill François-Xavier, Howden Benjamin P., Valcanis Mary, Niall De Lappe, Cormican Martin, Wangchuk Sonam, et al. , Nat Commun, 2019 10 23, Volume 10, Issue 1, (2019)
Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198., Hawkey, Jane, Le Hello Simon, Doublet Benoît, Granier Sophie A., Hendriksen Rene S., Fricke Florian W., Ceyssens Pieter-Jan, Gomart Camille, Billman-Jacobe Helen, Holt Kathryn E., et al. , Microb Genom, 2019 07, Volume 5, Issue 7, (2019)
RNA-Based susceptibility testing of Mycobacterium tuberculosis, Van den Bossche, An, Bhattacharyya Roby, Coppee Jean-Yves, Baulard Alain, Hung Deborah, Mathys Vanessa, and Ceyssens Pieter-Jan , 29th ECCMID, 1316 April, 2019, Issue ESCMID, Amsterdam, The Netherlands, (2019)
Shifting national surveillance of Shigella infections toward geno-serotyping by the development of a tailored Luminex assay and NGS workflow., Ventola, Eleonora, Bogaerts Bert, De Keersmaecker Sigrid C. J., Vanneste Kevin, Roosens Nancy, Mattheus Wesley, and Ceyssens Pieter-Jan , Microbiologyopen, 2019 Mar 28, (2019)
Strong increase of true and false positive mycobacterial cultures sent to the National Reference Centre in Belgium, 2007 to 2016., Soetaert, Karine, Subissi Lorenzo, Ceyssens Pieter-Jan, Vanfleteren Brigitte, Chantrenne Marianne, Asikainen Tommi, Duysburgh Els, and Mathys Vanessa , Euro Surveill, 2019 Mar, Volume 24, Issue 11, (2019)
Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid, Van den Bossche, An, Varet Hugo, Sury Amandine, Sismeiro Odile, Legendre Rachel, Coppee Jean-Yves, Mathys Vanessa, and Ceyssens Pieter-Jan , Tuberculosis, Jan-07-2019, Volume 117, (2019)
Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid., Van den Bossche, An, Varet Hugo, Sury Amandine, Sismeiro Odile, Legendre Rachel, Coppee Jean-Yves, Mathys Vanessa, and Ceyssens Pieter-Jan , Tuberculosis (Edinb), 2019 07, Volume 117, (2019)
Transcriptional profiling of Mycobacterium tuberculosis suggests respiratory poisoning upon exposure to delamanid, Van den Bossche, An, Varet Hugo, Sury Amandine, Sismeiro Odile, Legendre Rachel, Coppee Jean-Yves, Mathys Vanessa, and Ceyssens Pieter-Jan , 40th ESM conference, 30/6-3/7/2019, Issue European Society of Mycobacteria, Valencia, Spain, (2019)
Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: as a Proof-of-Concept., Bogaerts, Bert, Winand Raf, Qiang Fu, Van Braekel Julien, Ceyssens Pieter-Jan, Mattheus Wesley, Bertrand Sophie, De Keersmaecker Sigrid C. J., Roosens Nancy, and Vanneste Kevin , Front Microbiol, 2019, Volume 10, (2019)
2018
Aloe Emodin Reduces Phthiodiolone Dimycocerosate Potentiating Vancomycin Susceptibility on Mycobacteria, Rens, Céline, Ceyssens Pieter-Jan, Laval Françoise, Lefèvre Philippe, Mathys Vanessa, Daffé Mamadou, and Fontaine Véronique , Indian Journal of Microbiology, Apr-05-2018, (2018)
Evaluation of Non-Tuberculous Mycobacteria identification with maldi-tof mass spectrometry by applying sonication: a multicenter study, EU Mycobacteria-MALDI study group, Van den Bossche An, and Ceyssens Pieter-Jan , ECCMID 2018, 04/2018, Issue ESCMID, Madrid, Spain, (2018)
The Magistral Phage., Pirnay, Jean-Paul, Verbeken Gilbert, Ceyssens Pieter-Jan, Huys Isabelle, De Vos Daniel, Ameloot Charlotte, and Fauconnier Alan , Viruses, Volume 10, Issue 2, (2018)
Preparing cDNA Libraries from Lytic Phage-Infected Cells for Whole Transcriptome Analysis by RNA-Seq., Blasdel, Bob, Ceyssens Pieter-Jan, and Lavigne Rob , Methods Mol Biol, 2018, Volume 1681, Issue 1681, Number 1941, (2018)
Rapid detection of tetracycline resistance in bovine Pasteurella multocida isolates by MALDI Biotyper antibiotic susceptibility test rapid assay (MBT-ASTRA)., Van Driessche, Laura, Bokma Jade, Gille Linde, Ceyssens Pieter-Jan, Sparbier Katrin, Haesebrouck Freddy, Deprez Piet, Boyen Filip, and Pardon Bart , Sci Rep, 2018 Sep 11, Volume 8, Issue 1, (2018)
RNA-based drug susceptibility testing of Mycobacterium tuberculosis, Van den Bossche, An, Bhattacharyya Roby, Coppee Jean-Yves, Rigouts Leen, Baulard Alain, Hung Deborah, Mathys Vanessa, and Ceyssens Pieter-Jan , 39th Annual Congress of the European Society of Mycobacteriology , 07/2018, Issue ESM, Dresden, Germany, (2018)
RNA-based drug susceptibility testing of Mycobacterium tuberculosis, Van den Bossche, An, Bhattacharyya Roby, Coppee Jean-Yves, Rigouts Leen, Baulard Alain, Vodolazkaia Alexandra, Hung Deborah, Mathys Vanessa, and Ceyssens Pieter-Jan , 2nd St. Petersburg Symposium on Tuberculosis and Mycobacteria: Molecular Approach, Issue Institut Pasteur Sint Petersburg, Sint Petersburg, (2018)

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