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2025
be.Prepared: Setting up a cloud-based bioinformatics platform and coupled NRC usability platform for integrated genomic-epidemiological analysis at a national level, Gori, A., Kelchtermans Michael, Millis Kato, Van Laer Amber, Mairiaux Eric, initiative Members of the H. E. R., Van den Bossche An, Ceyssens Pieter-Jan, Mattheus Wesley, Mathys Vanessa, et al. , Applied Bioinformatics and Public Health Microbiology, 22/05/2025, Hixton, UK, (2025)
Oxford Nanopore Technologies R10 sequencing enables accurate cgMLST-based bacterial outbreak investigation of Neisseria meningitidis and Salmonella enterica when accounting for methylation-related errors, Bert, Bogaerts, Maex Margo, Commans Florian, Nathalie Goeders, Van den Bossche An, J. De Keersmaeck, C. Roosens, Nancy H., Ceyssens Pieter-Jan, Mattheus Wesley, and Kevin Vanneste , Journal of Clinical Microbiology, Oct-08-2026, (2025)
Salmonella spp. as a be.Prepared Case Study for Integrating Microbial Genomic and Health Data in Public Health Surveillance, Van Laer, Amber, Commans Florian, Mattheus Wesley, Van den Bossche An, Ceyssens Pieter-Jan, Vanneste Kevin, De Keersmaecker Sigrid C. J., Gori A., Kelchtermans Michael, Milis Kato, et al. , Scientific seminar for Infectious Diseases, 22/05/2025, Brussels, Belgium, (2025)
Speeding up drug susceptibility testing in Mycobacterium tuberculosis using RNA biomarkers, Sury*, Amandine, Maex Margo, Baulard Alain, Bhattacharyya Roby P., Depickère Stéphanie, Hung Deborah T., Paul Cos, Fadel Sayes, Wafa Frigui, Roland Brosch, et al. , eBioMedicine, Jan-03-2025, Volume 113, (2025)
2024
Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens., Bogaerts, Bert, Van den Bossche An, Verhaegen Bavo, Delbrassinne Laurence, Mattheus Wesley, Nouws Stéphanie, Godfroid Maxime, Hoffman Stefan, Roosens Nancy, De Keersmaecker Sigrid C. J., et al. , J Clin Microbiol, 2024 Mar 05, (2024)
Multinational collaboration in solving a European Braenderup outbreak linked to imported melons, 2021., Moore, Hannah L., Aabye Martine, Hoban Ann, Rosner Bettina, Lefevre Stine K., Litrup Eva, Müller Luise, Ethelberg Steen, Simon Sandra, Balasegaram Sooria, et al. , Euro Surveill, 2024 Jan, Volume 29, Issue 1, (2024)
Real-time cluster detection of Listeria to enhance outbreak investigation in Belgium, Van den Bossche, An, and Mattheus Wesley , Twenty-eight Conference on Food Microbiology (BSFM 2024), 2024, Brussels, Belgium, (2024)
Real-time cluster detection to enhance outbreak investigation in Belgium, Van den Bossche, An, and Mattheus Wesley , The 21th international symposium on problems of Listeria and Listeriosis (ISOPOL 2024), 2024, Norwich, UK, (2024)
2023
BSFM 2023 - L. monocytogenes in Plant-Based Foods : insights from of a recent foodborne outbreak linked to vegan alternative to cheese, Delbrassinne, Laurence, Van den Bossche An, Polet Marie, Mattheus Wesley, Christiaens Anneline, Verhaegen Bavo, and Van Hoorde Koenraad , BSFM, 10/2023, Brussels, Belgium, (2023)
Identification of Mycobacterium abscessus Subspecies by MALDI-TOF Mass Spectrometry and Machine LearningABSTRACT, Rodríguez-Temporal, David, Herrera Laura, Alcaide Fernando, Domingo Diego, Héry-Arnaud Genevieve, van Ingen Jakko, Van den Bossche An, Ingebretsen André, Beauruelle Clémence, Terschlüsen Eva, et al. , Journal of Clinical Microbiology, May-01-2023, (2023)
Identification of Mycobacterium abscessus Subspecies by MALDI-TOF Mass Spectrometry and Machine Learning., Rodríguez-Temporal, David, Herrera Laura, Alcaide Fernando, Domingo Diego, Héry-Arnaud Genevieve, van Ingen Jakko, Van den Bossche An, Ingebretsen André, Beauruelle Clémence, Terschlüsen Eva, et al. , J Clin Microbiol, 2023 Jan 26, Volume 61, Issue 1, (2023)
2022
The key role of WGS-based surveillance of Listeria monocytogenes in both human and food isolates in outbreak investigations, Van den Bossche, An, De Keersmaecker Sigrid C. J., Mattheus Wesley, Roosens Nancy, Bogaerts Bert, Vanneste Kevin, Van Hoorde Koenraad, and Verhaegen Bavo , 26th Conference on Food Microbiology, 13-14/10/2022, Issue BSFM, Brussels, Belgium, (2022)
Multicentre study on the reproducibility of MALDI-TOF MS for nontuberculous mycobacteria identification., Rodriguez-Temporal, David, Alcaide Fernando, Mareković Ivana, O'Connor James Anthony, Gorton Rebecca, van Ingen Jakko, Van den Bossche An, Héry-Arnaud Genevieve, Beauruelle Clémence, Orth-Höller Dorothea, et al. , Sci Rep, 2022 Jan 24, Volume 12, Issue 1, (2022)
2021
Coverage of the national surveillance system for human Salmonella infections, Belgium, 2016-2020., Van Goethem, Nina, Van den Bossche An, Ceyssens Pieter-Jan, Lajot Adrien, Coucke Wim, Vernelen Kris, Roosens Nancy, De Keersmaecker Sigrid C. J., Van Cauteren Dieter, and Mattheus Wesley , PLoS One, 2021, Volume 16, Issue 8, (2021)
Genomic epidemiology of persistently circulating MDR Shigella sonnei strains associated with men who have sex with men (MSM) in Belgium (2013–19), Fischer, Nathalie, Maex Margo, Mattheus Wesley, Van den Bossche An, Van Cauteren Dieter, Laisnez Valeska, Hammami Naïma, and Ceyssens Pieter-Jan , Journal of Antimicrobial Chemotherapy, Sep-10-2022, Volume 77, Issue 1, (2021)
A molecular assay for rapidly distinguishing the AviPro SALMONELLA VAC T vaccine strain from wild-type field isolates, Ceyssens, Pieter-Jan, Van den Bossche An, Phan Lac Kim, Van Hoorde Koenraad, and Mattheus Wesley , Journal of Microbiological Methods, May-2021, Volume 184, (2021)
Outbreak of Central American born Shigella sonnei in two youth camps in Belgium in the summer of 2019, Van den Bossche, An, Ceyssens Pieter-Jan, Denayer Sarah, Hammami Naïma, van den Beld Maaike, Dallman Timothy J., and Mattheus Wesley , European Journal of Clinical Microbiology & Infectious Diseases , 2021 Feb 11, (2021)
2019
Listeria surveillance in Belgium, Van den Bossche, An, and Mattheus Wesley , ISOPOL, 09/2019, Issue International Symposium on Problems with Listeria and Listeriosis, Toronto, Canada, (2019)
Phage–Host Protein–Protein Interactions Using Strep-tag® II Purifications, De Smet, Jeroen, Hendrix Hanne, and Van den Bossche An , Phage–Host Protein–Protein Interactions Using Strep-tag® II Purifications, Volume 1898, Issue 10, Number 136, New York, NY, p.117 - 136, (2019)
RNA-Based susceptibility testing of Mycobacterium tuberculosis, Van den Bossche, An, Bhattacharyya Roby, Coppee Jean-Yves, Baulard Alain, Hung Deborah, Mathys Vanessa, and Ceyssens Pieter-Jan , 29th ECCMID, 1316 April, 2019, Issue ESCMID, Amsterdam, The Netherlands, (2019)
Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid, Van den Bossche, An, Varet Hugo, Sury Amandine, Sismeiro Odile, Legendre Rachel, Coppee Jean-Yves, Mathys Vanessa, and Ceyssens Pieter-Jan , Tuberculosis, Jan-07-2019, Volume 117, (2019)
Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid., Van den Bossche, An, Varet Hugo, Sury Amandine, Sismeiro Odile, Legendre Rachel, Coppee Jean-Yves, Mathys Vanessa, and Ceyssens Pieter-Jan , Tuberculosis (Edinb), 2019 07, Volume 117, (2019)
Transcriptional profiling of Mycobacterium tuberculosis suggests respiratory poisoning upon exposure to delamanid, Van den Bossche, An, Varet Hugo, Sury Amandine, Sismeiro Odile, Legendre Rachel, Coppee Jean-Yves, Mathys Vanessa, and Ceyssens Pieter-Jan , 40th ESM conference, 30/6-3/7/2019, Issue European Society of Mycobacteria, Valencia, Spain, (2019)
2018
Evaluation of Non-Tuberculous Mycobacteria identification with maldi-tof mass spectrometry by applying sonication: a multicenter study, EU Mycobacteria-MALDI study group, Van den Bossche An, and Ceyssens Pieter-Jan , ECCMID 2018, 04/2018, Issue ESCMID, Madrid, Spain, (2018)
RNA-based drug susceptibility testing of Mycobacterium tuberculosis, Van den Bossche, An, Bhattacharyya Roby, Coppee Jean-Yves, Rigouts Leen, Baulard Alain, Vodolazkaia Alexandra, Hung Deborah, Mathys Vanessa, and Ceyssens Pieter-Jan , 2nd St. Petersburg Symposium on Tuberculosis and Mycobacteria: Molecular Approach, Issue Institut Pasteur Sint Petersburg, Sint Petersburg, (2018)

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