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Zoekresultaten - 268 results
Staphylococcal enterotoxin gene cluster: prediction of enterotoxin (SEG and SEI) production and of the source of food poisoning based on Saβ typing.
Publication Type: Peer reviewed scientific article Authors: L Schwendimann; D Merda; T Berger; Sarah Denayer; Tarisse C Feraudet; A J Kläui; S Messio; M Y Mistou; Y Nia; J A Hennekinne; H U Graber ...
Genomic epidemiology of emerging ESBL-producing Kentucky in Europe.
urinary-tract infections. Bayesian time-scaled phylogeny on whole genome sequences of isolates from these cases and supplementary isolates from public sequence databases was used to infer the origin and spread of ...
A genoserotyping system for a fast and objective identification of Salmonella serotypes commonly isolated from poultry and pork food sectors in Belgium.
activities in applied genomics Manuscript versions: DOI: https://doi.org/10.1016/j.fm.2020.103534 File: Version: Published Full text access: Public Access Full text language: English Category: A1 FOS ...
Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs.
Publication Type: Peer reviewed scientific article Authors: Agathe Jouet; Cyril Gaudin; Nelly Badalato; Allix-Béguec, Caroline; Stéphanie Duthoy; Alice Ferré; Maren Diels; Yannick Laurent; Sandy ...
Atypical Pathogenicity of Avian Influenza (H3N1) Virus Involved in Outbreak, Belgium, 2019
Publication Type: Peer reviewed scientific article Authors: Mieke Steensels; Philippe Lagacé-Wiens; Steven Van Borm; Thierry van den Berg; Corrigan, Tim; Virginie Roupie; Fabienne Rauw; Bénédicte ...
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.
Antibiotics (Basel), Volume 9, Issue 8 (2020) Keywords: Antimicrobial resistance MinION Plasmid sequencing Abstract: Antimicrobial resistance (AMR) is one of the most prominent public health threats. AMR genes ...
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Keersmaecker Source: Int J Mol Sci, Volume 21, Issue 16 (2020) Keywords: foodborne outbreak investigation public health strain-level metagenomics Abstract: Culture-independent diagnostics, such as metagenomic ...
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: https://doi.org/10.3390/microorganisms8081191 File: Version: Published Full text access: Public Access Full text ...
Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection.
available, we used the bioinformatics tool SCREENED and a total of 4755 publicly available SARS-CoV-2 genomes, downloaded at two different time points, to evaluate the specificity of 12 RT-qPCR tests ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
Transversale activiteiten in toegepaste genomica Transversal activities in applied genomics Manuscript versions: DOI: https://doi.org/10.3390/foods9081030 File: Version: Published Full text access: Public ...