Zoekresultaten - 12 results
be.Prepared to increase Belgian integration of health data as a way of strengthening preparedness for infectious diseases
Publication Type: Scientific poster, presentation or proceeding Authors: Heleen Masset; Amber Van Laer; Michael Kelchtermans; Kato Millis; Ann-Stephan Gori; Raf Winand; Sigrid C.J. De Keersmaecker ...
Strain-level characterization without culture enrichment? Easing and accelerating outbreak investigation using shotgun metagenomics facilitated with nanopore adaptive sampling
Publication Type: Scientific poster, presentation or proceeding Authors: Florence E Buytaers; Bavo Verhaegen; Tom Van Nieuwenhuysen; Nancy Roosens; Kevin Vanneste; Kathleen Marchal; Sigrid C.J. De ...
Whole-genome sequencing-based phylogenomic investigation of unexpected Bacillus cereus contaminations collected from commercial vitamin B2 food and feed additives sold on the Belgian market
Publication Type: Scientific poster, presentation or proceeding Authors: Bert Bogaerts; Marie-Alice Fraiture; Astrid, Huwaert; Tom Van Nieuwenhuysen; Bram Jacobs; Koenraad Van Hoorde; Sigrid C.J. De ...
Report on an initial assessment of long-read sequencing for metagenome (community and AMR) analysis (defined community, spiked and real simple and complex matrices) and comparison to current short-read standard
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Sigrid C.J. De Keersmaecker; Mathieu Gand; Indre Navickaite; Josephine Gruetzke; Lee-Julia Bartsch; Saria ...
Report on the feasibility of using Hi-C sequencing for metagenomics to define the context of AMR genes
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Sigrid C.J. De Keersmaecker; Josephine Grützke; Carlus Deneke; Jennie Fischer; Lee Julia Bartsch; Bram ...
Optimised long-read sequence bioinformatics tool for the analysis of the resistome and microbial communities
Bosco Rodríguez Matamoros; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: OpenAIRE, Zenodo, p.12 (2022) Accession Number: https://doi.org/10.5281/zenodo.7433258 URL: ...
Report on initial findings of on-site diagnostic tests and IT solutions for human clinical, veterinary and environmental samples for early warning of emerging resistant pathogens
Mathieu Gand; Nancy Roosens; Kevin Vanneste; Sigrid C.J. De Keersmaecker; Quillan Dijkstra; Saria Otani; Michael Brouwer Source: OpenAIRE, Zenodo, p.12 (2022) Accession Number: ...
A shotgun metagenomics approach to detect and characterize unauthorized genetically modified microorganisms in microbial fermentation products
Kathleen Marchal; Nancy Roosens; Sigrid C.J. De Keersmaecker Source: ONE Conference 2022, Issue EFSA (2022) Service: Activités transversales en génomique appliquée Transversale activiteiten in toegepaste ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
Piérard; Bert Bogaerts; Kathleen Marchal; The FARMED consortium; Nancy Roosens; Kevin Vanneste; Sigrid C.J. De Keersmaecker Source: EFSA One, Issue EFSA (2022) Abstract: Introduction: Open approaches to ...
Key considerations for the implementation of high throughput sequencing based metagenomics (mNGS) in diagnostic clinical, food and veterinary labs: a no-nonsense pointer. the Metastava consortium
Publication Type: Sci. report, recommendat°, guidance doc., directive, monograph Authors: Steven Van Borm; Frank Vandenbussche; Kris De Clercq; Andy Haegeman; Sigrid C.J. De Keersmaecker; Kevin ...