Zoekresultaten - 19 results

Strategy to Develop and Evaluate a Multiplex RT-ddPCR in Response to SARS-CoV-2 Genomic Evolution.

continuously evolving worldwide. In the present study, we proposed a methodology based on an in silico and in vitro analysis. First, we used all information offered by available whole-genome sequencing data for ...

Use of a Whole Genome Sequencing-based approach for Mycobacterium tuberculosis surveillance in Europe in 2017-2019: an ECDC pilot study.

Dick van Soolingen; Marieke J van der Werf; Daniela Maria Cirillo; ECDC molecular surveillance project participants Source: Eur Respir J (2020) Abstract: Whole genome sequencing (WGS) can be used for ...

NAuRA: Genomic Tool to Identify Staphylococcal Enterotoxins in Strains Responsible for FoodBorne Outbreaks.

presence of 27 SE s genes in just one analysis- and create a database of allelic data and protein variants for harmonizing analyses. This tool uses genome assembly data and the 27 protein sequences of SE s. ...

Listeria surveillance in Belgium

evolution in molecular typing, the NRC completely switched to Whole-Genome-Sequencing (WGS) for cluster detection. Therefore, an in-house Galaxy-based bio-informatic pipeline was developed. For the strain ...

Development of a real-time PCR method for the genoserotyping of Salmonella Paratyphi B variant Java.

biochemical tests. Therefore, a quadruplex real-time PCR method, based on the allelic discrimination of molecular markers selected from the scientific literature and from whole genome sequencing data produced ...

Roadbook for the implementation of next-generation sequencing in clinical practice in oncology and hemato-oncology in Belgium.

Doren; Anouk Waeytens; Marc Van den Bulcke Source: Arch Public Health, Volume 76 (2018) Abstract: In the field of oncology research, next-generation sequencing has contributed significantly to the ...

Multi-laboratory validation study of multilocus variable-number tandem repeat analysis (MLVA) for Salmonella enterica serovar Enteritidis, 2015.

Tuohy, Alma; de Pinna, Elizabeth Source: Euro Surveill, Volume 22, Issue 9 (2017) Keywords: China Disease Outbreaks Epidemiologic Studies Europe Humans Laboratories Minisatellite Repeats Molecular Typing ...

Whole Genome Sequence Analysis of Salmonella Enteritidis PT4 Outbreaks from a National Reference Laboratory's Viewpoint.

Brussels Case case studies Case study case-study Common data Discussion disease Diseases electronic epidemiology expertise food foodborne outbreaks future gene Genetic genetics Genome genomic Genomics health ...

Extensive genetic variability linked to IS26 insertions in the fljB promoter region of atypical monophasic variants of Salmonella enterica serovar Typhimurium.

Sequence Data Mutagenesis, Insertional polymerase chain reaction Promoter Regions, Genetic Salmonella Infections Salmonella Infections, Animal Salmonella typhimurium Sequence Analysis, DNA Swine Abstract: ...

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