Zoekresultaten - 5 results
Listeria surveillance in Belgium
evolution in molecular typing, the NRC completely switched to Whole-Genome-Sequencing (WGS) for cluster detection. Therefore, an in-house Galaxy-based bio-informatic pipeline was developed. For the strain ...
Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198.
an emerging problem within this serotype. We used whole-genome sequencing (WGS) to investigate the phylogenetic structure and AMR content of 121 S.enterica serotype Kentucky sequence type 198 isolates ...
Integrative transnational analysis to dissect tuberculosis transmission events along the migratory route from Africa to Europe.
sequencing (WGS) analysis. Data were compared with those from collections from other European countries receiving migrants from the HA and a strain-specific PCR was applied for a fast searching of common ...
Whole-genome-based phylogenomic analysis of the Belgian 2016-2017 influenza A(H3N2) outbreak season allows improved surveillance.
technologies enable a shift to whole-genome sequencing (WGS) for influenza surveillance, but this requires laboratory workflow adaptations and advanced bioinformatics workflows. In this study, 253 influenza ...
The key role of WGS-based surveillance of Listeria monocytogenes in both human and food isolates in outbreak investigations
Publication Type: Scientific poster, presentation or proceeding Authors: An Van den Bossche; Sigrid C.J. De Keersmaecker; Wesley Mattheus; Nancy Roosens; Bert Bogaerts; Kevin Vanneste; Koenraad Van Hoorde; Bavo Verhaegen Source: 26th Conference on Food Mi ...