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Zoekresultaten - 7 results
Transforming Shiga toxin-producing surveillance through whole genome sequencing in food safety practices.
Abstract: INTRODUCTION: Shiga toxin-producing (STEC) is a gastrointestinal pathogen causing foodborne outbreaks. Whole Genome Sequencing (WGS) in STEC surveillance holds promise in outbreak prevention and ...
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study.
Topics: Pathogenic E. coli Food-borne illness Pathogene E. coli E. coli pathogènes Voedseltoxi-infecties (toxi-)infection alimentaire (TIA) Service: Pathogènes alimentaires Voedselpathogenen Foodborne ...
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine.
Pathogenic E. coli Food-borne illness Voedseltoxi-infecties Service: Pathogènes alimentaires Voedselpathogenen Foodborne pathogens Activités transversales en génomique appliquée Transversale activiteiten in ...
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country.
whole genome sequencing Abstract: Gradually, conventional methods for foodborne pathogen typing are replaced by whole genome sequencing (WGS). Despite studies describing the overall benefits, National ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates
extraction, are required to ensure robust and exchangeable WGS data. Data sharing between (inter)national laboratories is essential to support foodborne pathogen control, including outbreak investigation. This ...
Associating sporadic, foodborne illness caused by Shiga toxin-producing Escherichia coli with specific foods: a systematic review and meta-analysis of case-control studies
Volume 147 (2019) Health Topics: Pathogenic E. coli Pathogene E. coli E. coli pathogènes Service: Information sanitaire Gezondheidsinformatie Health information Manuscript versions: DOI: ...
Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates.
laboratories is essential to support foodborne pathogen control, including outbreak investigation. This study evaluated eight commercial DNA preparation kits for their potential influence on: (i) DNA quality for ...