Zoekresultaten - 67 results
Development of strain-level shotgun metagenomics approaches to detect and characterize microbiological contaminants in the context of food safety
have always been analyzed and characterized after isolation. Since the advent of second generation sequencing, it has been possible to characterize the complete genome of these isolates to the SNP level. ...
First Belgian Report of Ertapenem Resistance in an ST11 Klebsiella Pneumoniae Strain Isolated from a Dog Carrying blaSCO-1 and blaDHA-1 Combined with Permeability Defects
ertapenem, third-generation cephalosporins and fluoroquinolones. A hybrid approach, combining long- and short-read sequencing, was employed for in silico plasmid characterization, multi-locus sequence typing ...
Shotgun metagenomics as a ONE Health tool for better protecting human health
in these settings, this approach should be appropriately developed and validated from sampling and DNA extraction to sequencing and data analysis. Methodology: Third generation sequencing technologies ...
Development, evaluation and optimization of next generation sequencing data analysis tools in support of a fast response for public health and food chain safety
Manuscript versions: DOI: http://hdl.handle.net/1854/LU-8755990 Full text language: English Category: Dissertations FOS Classification: 1.6 Biological sciences ...
Detection of regulated and prohibited plants in plant food supplements
OMCL is involved in two projects to tackle this problem. In the first a DNA metabarcoding approach is developed. In short DNA is extracted from the complex mixture, followed by next-generation sequencing ...
Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model.
sequencing Abstract: Even though Listeria monocytogenes is an extensive-studied foodborne pathogen, genome analysis of isolates from snails that may represent a reservoir of L. monocytogenes are still scarce. ...
Precision cancer medicine: What has translated into clinical use in Belgium?
Cancer Biol (2021) Keywords: cancer EVALUATION implementation Precision Medicine Abstract: RATIONALE: In 2016, Belgium launched the Next Generation Sequencing (NGS) Roadbook, consisting in 10 Actions, ...
Outbreak of Central American born Shigella sonnei in two youth camps in Belgium in the summer of 2019
European Journal of Clinical Microbiology & Infectious Diseases (2021) Keywords: Cluster analyses Next-generation sequencing outbreak Shigella sonnei Abstract: In 2019, an outbreak of Shigella sonnei ...
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination.
localized on plasmids can be easily transferred between bacterial isolates by horizontal gene transfer, thereby contributing to the spread of AMR. Next-generation sequencing (NGS) technologies are ideal for ...
Food Chemistry, Function and AnalysisDNA Techniques to Verify Food Authenticity CHAPTER 8. GMO Detection and Identification Using Next-generation Sequencing
p.96- 106 (2020) ISBN: 978-1-78801-178-5 Keywords: GMO Detection and Identification Using Next-generation Abstract: ext-generation sequencing (NGS) technologies are being increasingly evaluated for their ...