Zoekresultaten - 87 results
Strengthening Genomic Sequencing Capacities: be.Prepared
Publication Type: Scientific poster, presentation or proceeding Authors: Amber Van Laer; Heleen Masset; Members of the HERA-BE-WGS initiative Source: Strengthening Genomic Sequencing Capacities for ...
Salmonella spp. as a be.Prepared Case Study for Integrating Microbial Genomic and Health Data in Public Health Surveillance
Keersmaecker; A. Gori; Michael Kelchtermans; Kato Milis; Raf Winand; Eric Mairiaux; Daphné Rasier; Ruben Brondeel; Members of the HERA-BE-WGS initiative; Dieter Van Cauteren; Heleen Masset Source: Scientific ...
be.Prepared: Setting up a cloud-based bioinformatics platform and coupled NRC usability platform for integrated genomic-epidemiological analysis at a national level
Publication Type: Scientific poster, presentation or proceeding Authors: A. Gori; Michael Kelchtermans; Kato Millis; Amber Van Laer; Eric Mairiaux; Members of the HERA-BE-WGS initiative; An Van den ...
Galaxy @Sciensano: a comprehensive bioinformatics portal for genomics-based microbial typing, characterization, and outbreak detection.
Bacterial Genomics Humans SOFTWARE whole genome sequencing Abstract: The influx of whole genome sequencing (WGS) data in the public health and clinical diagnostic sectors has created a need for data analysis ...
Sheeppox virus genome sequences from the European outbreaks in Spain, Bulgaria, and Greece in 2022-2024.
whole-genome sequences (WGS s) were determined from samples collected during these outbreaks and analyzed in the context of all other published WGS s. Sheeppox virus strains can be divided in two, or possibly ...
BSFM 2024- Reported food-borne outbreaks in Belgium, 2023
identified as raw fermented milk produced in Belgium. The number of Belgian cases formally linked with the outbreak includes two cases in 2023 and one case in 2022 (identified through retrospective WGS ...
Retrospective surveillance of viable Bacillus cereus group contaminations in commercial food and feed vitamin B2 products sold on the Belgian market using whole-genome sequencing
whole-genome sequencing (WGS) and subsequently characterized in terms of sequence type (ST), virulence gene profile, antimicrobial resistance (AMR) gene profile, plasmid content, and phylogenomic relationships. ...
Antimicrobial resistance in ESBL and indicator E. coli, Campylobacter spp.,Salmonella spp., methicillin-resistant Staphylococcus aureus (MRSA) and Enterococcus faecalis and faecium isolated from food and food-producing animals (primary production) in 2023
resistance levels are lower in C. jejuni than in C. coli. In 2023, Salmonella spp. recovered from food matrices have been analysed by whole genome sequencing (WGS). The highest levels of predicted ...
Genomic comparison between and and analysis of peptide-based biomarkers for serodiagnosis.
whole genome sequencing (WGS) was used to search for protein-coding genes to distinguish from. In addition, the population structure of the available genomic WGS datasets is described, including three ...
Azithromycin resistance in Escherichia coli and Salmonella from food-producing animals and meat in Europe.
Escherichia coli and Salmonella collected within the EU harmonized antimicrobial resistance (AMR) surveillance programme in 2014-18 and the Danish AMR surveillance programme in 2016-19. METHODS: WGS data of ...